Entrez Gene ID | 114548 |
---|---|
Official Gene Symbol | NLRP3 (GeneCards) |
Full name | NLR family pyrin domain containing 3 |
Location | 1q44 |
Other ids | Vega : OTTHUMG00000040647 MIM : 606416 HGNC : HGNC:16400 Ensembl : ENSG00000162711 |
Other names | AII, AVP, FCU, MWS, FCAS, KEFH, CIAS1, FCAS1, NALP3, C1orf7, CLR1.1, DFNA34, PYPAF1, AGTAVPRL |
Summary | This gene encodes a pyrin-like protein containing a pyrin domain, a nucleotide-binding site (NBS) domain, and a leucine-rich repeat (LRR) motif. This protein interacts with the apoptosis-associated speck-like protein PYCARD/ASC, which contains a caspase recruitment domain, and is a member of the NALP3 inflammasome complex. This complex functions as an upstream activator of NF-kappaB signaling, and it plays a role in the regulation of inflammation, the immune response, and apoptosis. Mutations in this gene are associated with familial cold autoinflammatory syndrome (FCAS), Muckle-Wells syndrome (MWS), chronic infantile neurological cutaneous and articular (CINCA) syndrome, and neonatal-onset multisystem inflammatory disease (NOMID). Multiple alternatively spliced transcript variants encoding distinct isoforms have been identified for this gene. Alternative 5' UTR structures are suggested by available data; however, insufficient evidence is available to determine if all of the represented 5' UTR splice patterns are biologically valid. [provided by RefSeq, Oct 2008] |
Found 78 variants in this database.
Variant ID | Entrez Gene ID | Gene | Chromsome | Start | End | Disease | Method |
---|---|---|---|---|---|---|---|
2 | 114548 | NLRP3 | 1 | 247588449 | 247588449 | CINCA syndrome | HiSeq |
124 | 114548 | NLRP3 | 1 | 247587657 | 247587657 | CINCA syndrome | HiSeq Roche454 |
125 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 |
126 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 |
127 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 |
188 | 114548 | NLRP3 | 1 | 247592999 | 247592999 | CINCA syndrome | HiSeq Roche454 ABI3730 |
189 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 ABI3730 |
190 | 114548 | NLRP3 | 1 | 247592999 | 247592999 | CINCA syndrome | HiSeq Roche454 ABI3730 |
191 | 114548 | NLRP3 | 1 | 247588455 | 247588455 | CINCA syndrome | HiSeq Roche454 ABI3730 |
192 | 114548 | NLRP3 | 1 | 247588449 | 247588449 | CINCA syndrome | HiSeq Roche454 ABI3730 |
193 | 114548 | NLRP3 | 1 | 247587816 | 247587816 | CINCA syndrome | HiSeq Roche454 ABI3730 |
194 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
195 | 114548 | NLRP3 | 1 | 247587671 | 247587671 | CINCA syndrome | HiSeq Roche454 ABI3730 |
196 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
197 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
198 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
199 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
200 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
201 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 ABI3730 |
202 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 ABI3730 |
203 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 ABI3730 |
204 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 ABI3730 |
205 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 ABI3730 |
206 | 114548 | NLRP3 | 1 | 247587670 | 247587670 | CINCA syndrome | HiSeq Roche454 ABI3730 |
207 | 114548 | NLRP3 | 1 | 247587670 | 247587670 | CINCA syndrome | HiSeq Roche454 ABI3730 |
208 | 114548 | NLRP3 | 1 | 247587670 | 247587670 | CINCA syndrome | HiSeq Roche454 ABI3730 |
209 | 114548 | NLRP3 | 1 | 247587670 | 247587670 | CINCA syndrome | HiSeq Roche454 ABI3730 |
210 | 114548 | NLRP3 | 1 | 247587670 | 247587670 | CINCA syndrome | HiSeq Roche454 ABI3730 |
211 | 114548 | NLRP3 | 1 | 247587541 | 247587541 | CINCA syndrome | HiSeq Roche454 ABI3730 |
212 | 114548 | NLRP3 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 |
213 | 114548 | NLRP3 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 |
214 | 114548 | NLRP3 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 |
215 | 114548 | NLRP3 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 |
216 | 114548 | NLRP3 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 |
217 | 114548 | NLRP3 | 1 | 247588449 | 247588449 | CINCA syndrome | HiSeq Roche454 ABI3730 |
218 | 114548 | NLRP3 | 1 | 247587967 | 247587967 | CINCA syndrome | HiSeq Roche454 ABI3730 |
219 | 114548 | NLRP3 | 1 | 247588066 | 247588066 | CINCA syndrome | HiSeq Roche454 ABI3730 |
220 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
221 | 114548 | NLRP3 | 1 | 247588049 | 247588049 | CINCA syndrome | HiSeq Roche454 ABI3730 |
306 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 |
307 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 |
308 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 |
309 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 |
310 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 |
311 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 |
383 | 114548 | CIAS1 | 1 | 247425142 | 247425142 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA |
384 | 114548 | CIAS1 | 1 | 247424359 | 247424359 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA |
385 | 114548 | CIAS1 | 1 | 247424233 | 247424233 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA |
386 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 |
468 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 |
469 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 |
470 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 |
471 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 |
472 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 |
473 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 |
601 | 114548 | NLRP3 | 1 | 247588454 | 247588454 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 |
612 | 114548 | NLRP3 | 1 | 247588314 | 247588314 | Schnitzler syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq |
613 | 114548 | NLRP3 | 1 | 247588048 | 247588048 | Schnitzler syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq |
632 | 114548 | NLRP3 | 1 | 247587659 | 247587659 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
633 | 114548 | NLRP3 | 1 | 247587751 | 247587751 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
634 | 114548 | NLRP3 | 1 | 247587815 | 247587815 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
635 | 114548 | NLRP3 | 1 | 247587982 | 247587982 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
636 | 114548 | NLRP3 | 1 | 247587982 | 247587982 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
637 | 114548 | NLRP3 | 1 | 247588320 | 247588320 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
638 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
682 | 114548 | NLRP3 | 1 | 247588657 | 247588657 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM |
1468 | 114548 | NLRP3 | 1 | 247588443 | 247588443 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM |
1469 | 114548 | NLRP3 | 1 | 247588444 | 247588444 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM |
1470 | 114548 | NLRP3 | 1 | 247588435 | 247588435 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM |
1471 | 114548 | NLRP3 | 1 | 247588433 | 247588433 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM |
1472 | 114548 | NLRP3 | 1 | 247588043 | 247588043 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM |
1473 | 114548 | NLRP3 | 1 | 247588433 | 247588433 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |
1474 | 114548 | NLRP3 | 1 | 247588433 | 247588433 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |
1475 | 114548 | NLRP3 | 1 | 247588433 | 247588433 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |
1476 | 114548 | NLRP3 | 1 | 247588451 | 247588451 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |
1477 | 114548 | NLRP3 | 1 | 247588444 | 247588444 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |
1478 | 114548 | NLRP3 | 1 | 247588445 | 247588445 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |
1479 | 114548 | NLRP3 | 1 | 247588436 | 247588436 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |