| Entrez Gene ID | 114548 |
|---|---|
| Official Gene Symbol | NLRP3 (GeneCards) |
| Full name | NLR family pyrin domain containing 3 |
| Location | 1q44 |
| Other ids | Vega : OTTHUMG00000040647 MIM : 606416 HGNC : HGNC:16400 Ensembl : ENSG00000162711 |
| Other names | AII, AVP, FCU, MWS, FCAS, KEFH, CIAS1, FCAS1, NALP3, C1orf7, CLR1.1, DFNA34, PYPAF1, AGTAVPRL |
| Summary | This gene encodes a pyrin-like protein containing a pyrin domain, a nucleotide-binding site (NBS) domain, and a leucine-rich repeat (LRR) motif. This protein interacts with the apoptosis-associated speck-like protein PYCARD/ASC, which contains a caspase recruitment domain, and is a member of the NALP3 inflammasome complex. This complex functions as an upstream activator of NF-kappaB signaling, and it plays a role in the regulation of inflammation, the immune response, and apoptosis. Mutations in this gene are associated with familial cold autoinflammatory syndrome (FCAS), Muckle-Wells syndrome (MWS), chronic infantile neurological cutaneous and articular (CINCA) syndrome, and neonatal-onset multisystem inflammatory disease (NOMID). Multiple alternatively spliced transcript variants encoding distinct isoforms have been identified for this gene. Alternative 5' UTR structures are suggested by available data; however, insufficient evidence is available to determine if all of the represented 5' UTR splice patterns are biologically valid. [provided by RefSeq, Oct 2008] |
Found 78 variants in this database.
| Variant ID | Entrez Gene ID | Gene | Chromsome | Start | End | Disease | Method |
|---|---|---|---|---|---|---|---|
| 2 | 114548 | NLRP3 | 1 | 247588449 | 247588449 | CINCA syndrome | HiSeq |
| 124 | 114548 | NLRP3 | 1 | 247587657 | 247587657 | CINCA syndrome | HiSeq Roche454 |
| 125 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 |
| 126 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 |
| 127 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 |
| 188 | 114548 | NLRP3 | 1 | 247592999 | 247592999 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 189 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 190 | 114548 | NLRP3 | 1 | 247592999 | 247592999 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 191 | 114548 | NLRP3 | 1 | 247588455 | 247588455 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 192 | 114548 | NLRP3 | 1 | 247588449 | 247588449 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 193 | 114548 | NLRP3 | 1 | 247587816 | 247587816 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 194 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 195 | 114548 | NLRP3 | 1 | 247587671 | 247587671 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 196 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 197 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 198 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 199 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 200 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 201 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 202 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 203 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 204 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 205 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 206 | 114548 | NLRP3 | 1 | 247587670 | 247587670 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 207 | 114548 | NLRP3 | 1 | 247587670 | 247587670 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 208 | 114548 | NLRP3 | 1 | 247587670 | 247587670 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 209 | 114548 | NLRP3 | 1 | 247587670 | 247587670 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 210 | 114548 | NLRP3 | 1 | 247587670 | 247587670 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 211 | 114548 | NLRP3 | 1 | 247587541 | 247587541 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 212 | 114548 | NLRP3 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 213 | 114548 | NLRP3 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 214 | 114548 | NLRP3 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 215 | 114548 | NLRP3 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 216 | 114548 | NLRP3 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 217 | 114548 | NLRP3 | 1 | 247588449 | 247588449 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 218 | 114548 | NLRP3 | 1 | 247587967 | 247587967 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 219 | 114548 | NLRP3 | 1 | 247588066 | 247588066 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 220 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 221 | 114548 | NLRP3 | 1 | 247588049 | 247588049 | CINCA syndrome | HiSeq Roche454 ABI3730 |
| 306 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 |
| 307 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 |
| 308 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 |
| 309 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 |
| 310 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 |
| 311 | 114548 | NLRP3 | 1 | 247587658 | 247587658 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 |
| 383 | 114548 | CIAS1 | 1 | 247425142 | 247425142 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA |
| 384 | 114548 | CIAS1 | 1 | 247424359 | 247424359 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA |
| 385 | 114548 | CIAS1 | 1 | 247424233 | 247424233 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA |
| 386 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 |
| 468 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 |
| 469 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 |
| 470 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 |
| 471 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 |
| 472 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 |
| 473 | 114548 | CIAS1 | 1 | 247588460 | 247588460 | CINCA syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 |
| 601 | 114548 | NLRP3 | 1 | 247588454 | 247588454 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 |
| 612 | 114548 | NLRP3 | 1 | 247588314 | 247588314 | Schnitzler syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq |
| 613 | 114548 | NLRP3 | 1 | 247588048 | 247588048 | Schnitzler syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq |
| 632 | 114548 | NLRP3 | 1 | 247587659 | 247587659 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
| 633 | 114548 | NLRP3 | 1 | 247587751 | 247587751 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
| 634 | 114548 | NLRP3 | 1 | 247587815 | 247587815 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
| 635 | 114548 | NLRP3 | 1 | 247587982 | 247587982 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
| 636 | 114548 | NLRP3 | 1 | 247587982 | 247587982 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
| 637 | 114548 | NLRP3 | 1 | 247588320 | 247588320 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
| 638 | 114548 | NLRP3 | 1 | 247588450 | 247588450 | Muckle Wells syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger |
| 682 | 114548 | NLRP3 | 1 | 247588657 | 247588657 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM |
| 1468 | 114548 | NLRP3 | 1 | 247588443 | 247588443 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM |
| 1469 | 114548 | NLRP3 | 1 | 247588444 | 247588444 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM |
| 1470 | 114548 | NLRP3 | 1 | 247588435 | 247588435 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM |
| 1471 | 114548 | NLRP3 | 1 | 247588433 | 247588433 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM |
| 1472 | 114548 | NLRP3 | 1 | 247588043 | 247588043 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM |
| 1473 | 114548 | NLRP3 | 1 | 247588433 | 247588433 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |
| 1474 | 114548 | NLRP3 | 1 | 247588433 | 247588433 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |
| 1475 | 114548 | NLRP3 | 1 | 247588433 | 247588433 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |
| 1476 | 114548 | NLRP3 | 1 | 247588451 | 247588451 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |
| 1477 | 114548 | NLRP3 | 1 | 247588444 | 247588444 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |
| 1478 | 114548 | NLRP3 | 1 | 247588445 | 247588445 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |
| 1479 | 114548 | NLRP3 | 1 | 247588436 | 247588436 | Cryopyrin associated periodic syndrome | HiSeq Roche454 ABI3730 PSQ96 NA ABI3100 ABI310 HiSeq2000 MiSeq Sanger Ion Torrent PGM GS Junior 454 PGM IonTorrent Illumina MiSeq |