Overview

Variant ID 1043
Entrez Gene ID 4645
Gene MYO5B (GeneCards)
Location hg19 18:47402174-47402174
hg38 18:49875804-49875804
Disease Human Skin Fibroblasts (view all the variants in this disease)
Method HiSeq 2500
Mutation(HGVS format) NC_000018.9:g.47402174 G>A (Genome Assembly: hg19)

Other information

Exon or Intron Exon
Position in protein 1140
Amino acid changes in protein A > A
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 78077248

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score 1.6085
CADD Raw score (version 1.3) 1.350218 (Deleterious)
FATHMM raw prediction score 0.93789 (Tolerated)
Deleterious probability by DeFine 0.9021 (Deleterious)
Entrez Gene ID 4645 (NCBI Gene)
Official Gene Symbol MYO5B (GeneCards)
Number of variants in MYO5B in this database 5 (view all the variants)
Full name myosin VB
Band 18q21.1
Other IDs Vega: OTTHUMG00000179843
OMIM: 606540
HGNC: HGNC:7603
Ensembl: ENSG00000167306
Other names None
Summary The protein encoded by this gene, together with other proteins, may be involved in plasma membrane recycling. Mutations in this gene are associated with microvillous inclusion disease. [provided by RefSeq, Sep 2009]

Individual #1

Individual ID 27788131.02 (view all the variants in this individual)
Pubmed ID 27788131
Whose mosaic mutation Normal  
Phenotype 1  
Disease Human Skin Fibroblasts (view all the variants in this disease)
OMIM ID 120353

Publication #1: 27788131

Pubmed ID 27788131
Title The Impact of Environmental and Endogenous Damage on Somatic Mutation Load in Human Skin Fibroblasts.
Journal PLoS Genetics
Publication date 2016.10
Disease Human Skin Fibroblasts
Population Caucasian
Number of cases Male cases: 2;