Overview

Variant ID 1128
Entrez Gene ID 54758
Gene KLHDC4 (GeneCards)
Location hg19 16:87760455-87760455
hg38 16:87726849-87726849
Disease Human Skin Fibroblasts (view all the variants in this disease)
Method HiSeq 2500
Mutation(HGVS format) NC_000016.9:g.87760455 C>T (Genome Assembly: hg19)

Other information

Exon or Intron Exon
Position in protein 225
Amino acid changes in protein G > G
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 90354753

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score 0.1262
CADD Raw score (version 1.3) 0.837707 (Deleterious)
FATHMM raw prediction score 0.23511 (Tolerated)
Deleterious probability by DeFine 0.9613 (Deleterious)
Entrez Gene ID 54758 (NCBI Gene)
Official Gene Symbol KLHDC4 (GeneCards)
Number of variants in KLHDC4 in this database 1 (view all the variants)
Full name kelch domain containing 4
Band 16q24.2
Other IDs Vega: OTTHUMG00000137657
HGNC: HGNC:25272
Ensembl: ENSG00000104731
Other names None
Summary None

Individual #1

Individual ID 27788131.02 (view all the variants in this individual)
Pubmed ID 27788131
Whose mosaic mutation Normal  
Phenotype 1  
Disease Human Skin Fibroblasts (view all the variants in this disease)
OMIM ID 120353

Publication #1: 27788131

Pubmed ID 27788131
Title The Impact of Environmental and Endogenous Damage on Somatic Mutation Load in Human Skin Fibroblasts.
Journal PLoS Genetics
Publication date 2016.10
Disease Human Skin Fibroblasts
Population Caucasian
Number of cases Male cases: 2;