| Variant ID | 11355 |
|---|---|
| Entrez Gene ID | 4951 |
| Gene | OCM2 (GeneCards) |
| Location | hg19 7:97694942-97694942
hg38 7:98065630-98065630 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000007.13:g.97694942 A>T (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 159138663 |
| MAF in gnomAD genome (version 2.0.1) | 0.0001 |
|---|---|
| EIGEN score | -0.2815 |
| CADD Raw score (version 1.3) | -0.451378 (Deleterious) |
| FATHMM raw prediction score | 0.11511 (Tolerated) |
| Deleterious probability by DeFine | 0.0425 (Neutral) |
| Entrez Gene ID | 4951 (NCBI Gene) |
|---|---|
| Official Gene Symbol | OCM2 (GeneCards) |
| Number of variants in OCM2 in this database | 2 (view all the variants) |
| Full name | oncomodulin 2 |
| Band | 7q21.3 |
| Other IDs | Vega: OTTHUMG00000154162 HGNC: HGNC:34396 Ensembl: ENSG00000135175 |
| Other names | OM, OCM |
| Summary | This gene is similar to the oncomodulin gene, a high-affinity calcium ion-binding protein that belongs to the superfamily of calmodulin proteins, also known as the EF-hand proteins. [provided by RefSeq, Jul 2008] |
| Individual ID | 29217584.16 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Female Patient |
| Phenotype | 3 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| OMIM ID | 216400 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |