| Variant ID | 11357 |
|---|---|
| Entrez Gene ID | 79783 |
| Gene | SUGCT (GeneCards) |
| Location | hg19 7:40351778-40351778
hg38 7:40312179-40312179 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000007.13:g.40351778 G>T (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 159138663 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | -0.6445 |
| CADD Raw score (version 1.3) | -0.597258 (Deleterious) |
| FATHMM raw prediction score | 0.05478 (Tolerated) |
| Deleterious probability by DeFine | 0.1488 (Neutral) |
| Entrez Gene ID | 79783 (NCBI Gene) |
|---|---|
| Official Gene Symbol | SUGCT (GeneCards) |
| Number of variants in SUGCT in this database | 8 (view all the variants) |
| Full name | succinyl-CoA:glutarate-CoA transferase |
| Band | 7p14.1 |
| Other IDs | Vega: OTTHUMG00000155094 OMIM: 609187 HGNC: HGNC:16001 Ensembl: ENSG00000175600 |
| Other names | GA3, ORF19, DERP13, C7orf10 |
| Summary | This gene encodes a protein that is similar to members of the CaiB/baiF CoA-transferase protein family. Mutations in this gene are associated with glutaric aciduria type III. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Jul 2010] |
| Individual ID | 29217584.16 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Female Patient |
| Phenotype | 3 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| OMIM ID | 216400 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |