| Variant ID | 11439 |
|---|---|
| Entrez Gene ID | 378805 |
| Gene | LINC-PINT (GeneCards) |
| Location | hg19 7:130578062-130578062
hg38 7:130893303-130893303 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000007.13:g.130578062 G>A (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 159138663 |
| MAF in gnomAD genome (version 2.0.1) | 0.0011 |
|---|---|
| EIGEN score | -0.3165 |
| CADD Raw score (version 1.3) | 0.088989 (Deleterious) |
| FATHMM raw prediction score | 0.08533 (Tolerated) |
| Deleterious probability by DeFine | 0.1368 (Neutral) |
| Entrez Gene ID | 378805 (NCBI Gene) |
|---|---|
| Official Gene Symbol | LINC-PINT (GeneCards) |
| Number of variants in LINC-PINT in this database | 5 (view all the variants) |
| Full name | long intergenic non-protein coding RNA, p53 induced transcript |
| Band | 7q32.3 |
| Other IDs | HGNC: HGNC:26885 Ensembl: ENSG00000231721 |
| Other names | PINT, MKLN1-AS1, LincRNA-Pint |
| Summary | None |
| Individual ID | 29217584.19 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Female Patient |
| Phenotype | 3 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| OMIM ID | 216400 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |