| Variant ID | 11454 |
|---|---|
| Entrez Gene ID | 80853 |
| Gene | KDM7A (GeneCards) |
| Location | hg19 7:139814502-139814502
hg38 7:140114702-140114702 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000007.13:g.139814502 C>T (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 159138663 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | -0.4157 |
| CADD Raw score (version 1.3) | -0.042496 (Deleterious) |
| FATHMM raw prediction score | 0.05045 (Tolerated) |
| Deleterious probability by DeFine | 0.144 (Neutral) |
| Entrez Gene ID | 80853 (NCBI Gene) |
|---|---|
| Official Gene Symbol | KDM7A (GeneCards) |
| Number of variants in KDM7A in this database | 3 (view all the variants) |
| Full name | lysine demethylase 7A |
| Band | 7q34 |
| Other IDs | Vega: OTTHUMG00000157327 HGNC: HGNC:22224 Ensembl: ENSG00000006459 |
| Other names | JHDM1D |
| Summary | None |
| Individual ID | 29217584.20 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Male Patient |
| Phenotype | 3 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| OMIM ID | 216400 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |