Overview

Variant ID 11547
Entrez Gene ID 101927746
Gene LOC101927746 (GeneCards)
Location hg19 7:100952031-100952031
hg38 7:101308750-101308750
Disease Xeroderma Pigmentosum (view all the variants in this disease)
Method HiSeq X Ten
Mutation(HGVS format) NC_000007.13:g.100952031 G>A (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 159138663

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score 0.8516
CADD Raw score (version 1.3) 0.807406 (Deleterious)
FATHMM raw prediction score 0.31115 (Tolerated)
Deleterious probability by DeFine 0.1978 (Neutral)
Entrez Gene ID 101927746 (NCBI Gene)
Official Gene Symbol LOC101927746 (GeneCards)
Number of variants in LOC101927746 in this database 2 (view all the variants)
Full name uncharacterized LOC101927746
Band 7q22.1
Other IDs None:
Other names None
Summary None

Individual #1

Individual ID 29217584.23 (view all the variants in this individual)
Pubmed ID 29217584
Whose mosaic mutation Female Patient  
Phenotype 3  
Disease Xeroderma Pigmentosum (view all the variants in this disease)
OMIM ID 278700

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;