Variant ID | 1233 |
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Entrez Gene ID | 50509 |
Gene | COL5A3 (GeneCards) |
Location | hg19 19:10092741-10092741
hg38 19:9982065-9982065 |
Disease | Autism Spectrum Disorders (view all the variants in this disease) |
Method | NextSeq500 v2 |
Mutation(HGVS format) | NC_000019.9:g.10092741_10092741 del (Genome Assembly: hg19) |
Exon or Intron | Exon |
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Position in protein | NA |
Amino acid changes in protein | NA > NA |
Position in cDNA | NA |
Changes in cDNA | NA > NA |
mRNA accession | NM_015719.3 |
mRNA length | 6192 |
Reference length | 59128983 |
Deleterious probability by DeFine | 0.9166 (Deleterious) |
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Entrez Gene ID | 50509 (NCBI Gene) |
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Official Gene Symbol | COL5A3 (GeneCards) |
Number of variants in COL5A3 in this database | 6 (view all the variants) |
Full name | collagen type V alpha 3 chain |
Band | 19p13.2 |
Other IDs | Vega: OTTHUMG00000150019 OMIM: 120216 HGNC: HGNC:14864 Ensembl: ENSG00000080573 |
Other names | None |
Summary | This gene encodes an alpha chain for one of the low abundance fibrillar collagens. Fibrillar collagen molecules are trimers that can be composed of one or more types of alpha chains. Type V collagen is found in tissues containing type I collagen and appears to regulate the assembly of heterotypic fibers composed of both type I and type V collagen. This gene product is closely related to type XI collagen and it is possible that the collagen chains of types V and XI constitute a single collagen type with tissue-specific chain combinations. Mutations in this gene are thought to be responsible for the symptoms of a subset of patients with Ehlers-Danlos syndrome type III. Messages of several sizes can be detected in northern blots but sequence information cannot confirm the identity of the shorter messages. [provided by RefSeq, Jul 2008] |
Individual ID | 28867142.32 (view all the variants in this individual) |
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Pubmed ID | 28867142 |
Whose mosaic mutation | Male Patient |
Origin of mosaic mutation in patients | de novo |
Phenotype | 3 |
Disease | Autism Spectrum Disorders (view all the variants in this disease) |
OMIM ID | 209850 |
Pubmed ID | 28867142 |
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Title | Exonic Mosaic Mutations Contribute Risk for Autism Spectrum Disorder |
Journal | American Journal of Human Genetics |
Publication date | 2017.08 |
Disease | Autism Spectrum Disorders |
Incidence | 0.01 |
Number of cases | cases of unknown sex: 247; |