| Variant ID | 13786 |
|---|---|
| Entrez Gene ID | 54914 |
| Gene | FOCAD (GeneCards) |
| Location | hg19 9:20963101-20963101
hg38 9:20963102-20963102 |
| Disease | Xeroderma Pigmentosum (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000009.11:g.20963101 C>T (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 141213431 |
| MAF in gnomAD genome (version 2.0.1) | 0.00003229 |
|---|---|
| EIGEN score | 0.2844 |
| CADD Raw score (version 1.3) | 0.268013 (Deleterious) |
| FATHMM raw prediction score | 0.1803 (Tolerated) |
| Deleterious probability by DeFine | 0.6108 (Deleterious) |
| Entrez Gene ID | 54914 (NCBI Gene) |
|---|---|
| Official Gene Symbol | FOCAD (GeneCards) |
| Number of variants in FOCAD in this database | 5 (view all the variants) |
| Full name | focadhesin |
| Band | 9p21.3 |
| Other IDs | Vega: OTTHUMG00000066930 OMIM: 614606 HGNC: HGNC:23377 Ensembl: ENSG00000188352 |
| Other names | KIAA1797 |
| Summary | None |
| Individual ID | 29217584.23 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Female Patient |
| Phenotype | 3 |
| Disease | Xeroderma Pigmentosum (view all the variants in this disease) |
| OMIM ID | 278700 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |