| Variant ID | 13901 |
|---|---|
| Entrez Gene ID | 84898 |
| Gene | PLXDC2 (GeneCards) |
| Location | hg19 10:20193947-20193947
hg38 10:19905018-19905018 |
| Disease | Asymptomatic |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000010.10:g.20193947 C>T (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 135534747 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | -0.2818 |
| CADD Raw score (version 1.3) | 0.158238 (Deleterious) |
| FATHMM raw prediction score | 0.08199 (Tolerated) |
| Deleterious probability by DeFine | 0.4396 (Neutral) |
| Entrez Gene ID | 84898 (NCBI Gene) |
|---|---|
| Official Gene Symbol | PLXDC2 (GeneCards) |
| Number of variants in PLXDC2 in this database | 8 (view all the variants) |
| Full name | plexin domain containing 2 |
| Band | 10p12.31 |
| Other IDs | Vega: OTTHUMG00000017781 OMIM: 606827 HGNC: HGNC:21013 Ensembl: ENSG00000120594 |
| Other names | TEM7R |
| Summary | None |
| Individual ID | 29217584.03 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Normal |
| Phenotype | 1 |
| Disease | Asymptomatic |
| OMIM ID |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |