Overview

Variant ID 14793
Entrez Gene ID 26033
Gene ATRNL1 (GeneCards)
Location hg19 10:117108344-117108344
hg38 10:115348834-115348834
Disease Cockayne syndrome (view all the variants in this disease)
Method HiSeq X Ten
Mutation(HGVS format) NC_000010.10:g.117108344 A>G (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 135534747

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
CADD Raw score (version 1.3) -0.133218 (Deleterious)
FATHMM raw prediction score 0.07944 (Tolerated)
Deleterious probability by DeFine 0.0667 (Neutral)
Entrez Gene ID 26033 (NCBI Gene)
Official Gene Symbol ATRNL1 (GeneCards)
Number of variants in ATRNL1 in this database 10 (view all the variants)
Full name attractin like 1
Band 10q25.3
Other IDs Vega: OTTHUMG00000019096
OMIM: 612869
HGNC: HGNC:29063
Ensembl: ENSG00000107518
Other names ALP, bA338L11.1, bA454H24.1
Summary None

Individual #1

Individual ID 29217584.19 (view all the variants in this individual)
Pubmed ID 29217584
Whose mosaic mutation Female Patient  
Phenotype 3  
Disease Cockayne syndrome (view all the variants in this disease)
OMIM ID 216400

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;