| Variant ID | 14916 |
|---|---|
| Entrez Gene ID | 84569 |
| Gene | LYZL1 (GeneCards) |
| Location | hg19 10:29650317-29650317
hg38 10:29361388-29361388 |
| Disease | Xeroderma Pigmentosum (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000010.10:g.29650317 G>A (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 135534747 |
| MAF in gnomAD genome (version 2.0.1) | 0.0001 |
|---|---|
| EIGEN score | -0.1771 |
| CADD Raw score (version 1.3) | -0.330594 (Deleterious) |
| FATHMM raw prediction score | 0.16573 (Tolerated) |
| Deleterious probability by DeFine | 0.0794 (Neutral) |
| Entrez Gene ID | 84569 (NCBI Gene) |
|---|---|
| Official Gene Symbol | LYZL1 (GeneCards) |
| Number of variants in LYZL1 in this database | 1 (view all the variants) |
| Full name | lysozyme like 1 |
| Band | 10p12.1-p11.23 |
| Other IDs | Vega: OTTHUMG00000017880 HGNC: HGNC:30502 Ensembl: ENSG00000120563 |
| Other names | LYC2, LYZD1, KAAG648, PRO1278, bA534G20.1 |
| Summary | None |
| Individual ID | 29217584.23 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Female Patient |
| Phenotype | 3 |
| Disease | Xeroderma Pigmentosum (view all the variants in this disease) |
| OMIM ID | 278700 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |