| Variant ID | 15561 |
|---|---|
| Entrez Gene ID | 1408 |
| Gene | CRY2 (GeneCards) |
| Location | hg19 11:45878924-45878924
hg38 11:45857373-45857373 |
| Disease | Asymptomatic |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000011.9:g.45878924 C>T (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 135006516 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | 0.116 |
| CADD Raw score (version 1.3) | 0.446461 (Deleterious) |
| FATHMM raw prediction score | 0.10429 (Tolerated) |
| Deleterious probability by DeFine | 0.5837 (Deleterious) |
| Entrez Gene ID | 1408 (NCBI Gene) |
|---|---|
| Official Gene Symbol | CRY2 (GeneCards) |
| Number of variants in CRY2 in this database | 3 (view all the variants) |
| Full name | cryptochrome circadian regulator 2 |
| Band | 11p11.2 |
| Other IDs | Vega: OTTHUMG00000153225 OMIM: 603732 HGNC: HGNC:2385 Ensembl: ENSG00000121671 |
| Other names | HCRY2, PHLL2 |
| Summary | This gene encodes a flavin adenine dinucleotide-binding protein that is a key component of the circadian core oscillator complex, which regulates the circadian clock. This gene is upregulated by CLOCK/ARNTL heterodimers but then represses this upregulation in a feedback loop using PER/CRY heterodimers to interact with CLOCK/ARNTL. Polymorphisms in this gene have been associated with altered sleep patterns. The encoded protein is widely conserved across plants and animals. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Feb 2014] |
| Individual ID | 29217584.13 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Normal |
| Phenotype | 1 |
| Disease | Asymptomatic |
| OMIM ID |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |