Overview

Variant ID 15902
Entrez Gene ID 101929497
Gene LOC101929497 (GeneCards)
Location hg19 11:127908957-127908957
hg38 11:128039062-128039062
Disease Cockayne syndrome (view all the variants in this disease)
Method HiSeq X Ten
Mutation(HGVS format) NC_000011.9:g.127908957 C>T (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 135006516

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
CADD Raw score (version 1.3) 0.018489 (Deleterious)
FATHMM raw prediction score 0.09466 (Tolerated)
Deleterious probability by DeFine 0.4655 (Neutral)
Entrez Gene ID 101929497 (NCBI Gene)
Official Gene Symbol LOC101929497 (GeneCards)
Number of variants in LOC101929497 in this database 20 (view all the variants)
Full name uncharacterized LOC101929497
Band 11q24.2
Other IDs Ensembl: ENSG00000273409
Other names None
Summary None

Individual #1

Individual ID 29217584.19 (view all the variants in this individual)
Pubmed ID 29217584
Whose mosaic mutation Female Patient  
Phenotype 3  
Disease Cockayne syndrome (view all the variants in this disease)
OMIM ID 216400

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;