| Variant ID | 15996 |
|---|---|
| Entrez Gene ID | 2977 |
| Gene | GUCY1A2 (GeneCards) |
| Location | hg19 11:106993524-106993524
hg38 11:107122798-107122798 |
| Disease | Xeroderma Pigmentosum (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000011.9:g.106993524 T>C (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 135006516 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | -0.6417 |
| CADD Raw score (version 1.3) | -0.544141 (Deleterious) |
| FATHMM raw prediction score | 0.04245 (Tolerated) |
| Deleterious probability by DeFine | 0.0641 (Neutral) |
| Entrez Gene ID | 2977 (NCBI Gene) |
|---|---|
| Official Gene Symbol | GUCY1A2 (GeneCards) |
| Number of variants in GUCY1A2 in this database | 10 (view all the variants) |
| Full name | guanylate cyclase 1 soluble subunit alpha 2 |
| Band | 11q22.3 |
| Other IDs | Vega: OTTHUMG00000166296 OMIM: 601244 HGNC: HGNC:4684 Ensembl: ENSG00000152402 |
| Other names | GC-SA2, GUC1A2 |
| Summary | Soluble guanylate cyclases are heterodimeric proteins that catalyze the conversion of GTP to 3',5'-cyclic GMP and pyrophosphate. The protein encoded by this gene is an alpha subunit of this complex and it interacts with a beta subunit to form the guanylate cyclase enzyme, which is activated by nitric oxide. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2012] |
| Individual ID | 29217584.23 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Female Patient |
| Phenotype | 3 |
| Disease | Xeroderma Pigmentosum (view all the variants in this disease) |
| OMIM ID | 278700 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |