Overview

Variant ID 16899
Entrez Gene ID 10198
Gene MPHOSPH9 (GeneCards)
Location hg19 12:123688531-123688531
hg38 12:123203984-123203984
Disease Cockayne syndrome (view all the variants in this disease)
Method HiSeq X Ten
Mutation(HGVS format) NC_000012.11:g.123688531 G>A (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 133851895

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score -0.3401
CADD Raw score (version 1.3) -0.021603 (Deleterious)
FATHMM raw prediction score 0.06762 (Tolerated)
Deleterious probability by DeFine 0.0933 (Neutral)
Entrez Gene ID 10198 (NCBI Gene)
Official Gene Symbol MPHOSPH9 (GeneCards)
Number of variants in MPHOSPH9 in this database 1 (view all the variants)
Full name M-phase phosphoprotein 9
Band 12q24.31
Other IDs Vega: OTTHUMG00000168849
OMIM: 605501
HGNC: HGNC:7215
Ensembl: ENSG00000051825
Other names MPP9, MPP-9
Summary None

Individual #1

Individual ID 29217584.16 (view all the variants in this individual)
Pubmed ID 29217584
Whose mosaic mutation Female Patient  
Phenotype 3  
Disease Cockayne syndrome (view all the variants in this disease)
OMIM ID 216400

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;