| Variant ID | 18593 |
|---|---|
| Entrez Gene ID | 145581 |
| Gene | LRFN5 (GeneCards) |
| Location | hg19 14:43380066-43380066
hg38 14:42910863-42910863 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000014.8:g.43380066 G>A (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 107349540 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | -0.3291 |
| CADD Raw score (version 1.3) | 0.065602 (Deleterious) |
| FATHMM raw prediction score | 0.08291 (Tolerated) |
| Deleterious probability by DeFine | 0.0792 (Neutral) |
| Entrez Gene ID | 145581 (NCBI Gene) |
|---|---|
| Official Gene Symbol | LRFN5 (GeneCards) |
| Number of variants in LRFN5 in this database | 36 (view all the variants) |
| Full name | leucine rich repeat and fibronectin type III domain containing 5 |
| Band | 14q21.1 |
| Other IDs | Vega: OTTHUMG00000140261 OMIM: 612811 HGNC: HGNC:20360 Ensembl: ENSG00000165379 |
| Other names | SALM5, FIGLER8, C14orf146 |
| Summary | This gene encodes a protein that belongs to the leucine-rich repeat and fibronectin type III domain-containing family of proteins. A similar protein in mouse, a glycosylated transmembrane protein, is thought to function in presynaptic differentiation. [provided by RefSeq, Sep 2016] |
| Individual ID | 29217584.16 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Female Patient |
| Phenotype | 3 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| OMIM ID | 216400 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |