| Variant ID | 18595 |
|---|---|
| Entrez Gene ID | 100506433 |
| Gene | LINC00648 (GeneCards) |
| Location | hg19 14:48532434-48532434
hg38 14:48063231-48063231 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000014.8:g.48532434 C>T (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 107349540 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | -0.2818 |
| CADD Raw score (version 1.3) | -0.125311 (Deleterious) |
| FATHMM raw prediction score | 0.05873 (Tolerated) |
| Deleterious probability by DeFine | 0.0423 (Neutral) |
| Entrez Gene ID | 100506433 (NCBI Gene) |
|---|---|
| Official Gene Symbol | LINC00648 (GeneCards) |
| Number of variants in LINC00648 in this database | 45 (view all the variants) |
| Full name | long intergenic non-protein coding RNA 648 |
| Band | 14q21.3 |
| Other IDs | HGNC: HGNC:44302 Ensembl: ENSG00000259129 |
| Other names | None |
| Summary | None |
| Individual ID | 29217584.17 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Female Patient |
| Phenotype | 3 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| OMIM ID | 216400 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |