| Variant ID | 18770 |
|---|---|
| Entrez Gene ID | 2558 |
| Gene | GABRA5 (GeneCards) |
| Location | hg19 15:27189655-27189655
hg38 15:26944508-26944508 |
| Disease | Asymptomatic |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000015.9:g.27189655 G>A (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 102531392 |
| MAF in gnomAD genome (version 2.0.1) | 0.016 |
|---|---|
| SNP ID (dbSNP ID version 137) | rs28492044 |
| EIGEN score | -0.1035 |
| CADD Raw score (version 1.3) | 0.156712 (Deleterious) |
| FATHMM raw prediction score | 0.17436 (Tolerated) |
| Deleterious probability by DeFine | 0.3215 (Neutral) |
| Entrez Gene ID | 2558 (NCBI Gene) |
|---|---|
| Official Gene Symbol | GABRA5 (GeneCards) |
| Number of variants in GABRA5 in this database | 4 (view all the variants) |
| Full name | gamma-aminobutyric acid type A receptor alpha5 subunit |
| Band | 15q12 |
| Other IDs | Vega: OTTHUMG00000171824 OMIM: 137142 HGNC: HGNC:4079 Ensembl: ENSG00000186297 |
| Other names | None |
| Summary | GABA is the major inhibitory neurotransmitter in the mammalian brain where it acts at GABA-A receptors, which are ligand-gated chloride channels. Chloride conductance of these channels can be modulated by agents such as benzodiazepines that bind to the GABA-A receptor. At least 16 distinct subunits of GABA-A receptors have been identified. Transcript variants utilizing three different alternative non-coding first exons have been described. [provided by RefSeq, Jul 2008] |
| Individual ID | 29217584.03 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Normal |
| Phenotype | 1 |
| Disease | Asymptomatic |
| OMIM ID |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |