| Variant ID | 19679 |
|---|---|
| Entrez Gene ID | 23035 |
| Gene | PHLPP2 (GeneCards) |
| Location | hg19 16:71726912-71726912
hg38 16:71693009-71693009 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000016.9:g.71726912 G>A (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 90354753 |
| MAF in gnomAD genome (version 2.0.1) | 0.00003233 |
|---|---|
| EIGEN score | -0.2383 |
| CADD Raw score (version 1.3) | 0.037164 (Deleterious) |
| FATHMM raw prediction score | 0.1133 (Tolerated) |
| Deleterious probability by DeFine | 0.1578 (Neutral) |
| Entrez Gene ID | 23035 (NCBI Gene) |
|---|---|
| Official Gene Symbol | PHLPP2 (GeneCards) |
| Number of variants in PHLPP2 in this database | 1 (view all the variants) |
| Full name | PH domain and leucine rich repeat protein phosphatase 2 |
| Band | 16q22.2 |
| Other IDs | Vega: OTTHUMG00000176867 OMIM: 611066 HGNC: HGNC:29149 Ensembl: ENSG00000040199 |
| Other names | PPM3B, PHLPPL |
| Summary | None |
| Individual ID | 29217584.16 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Female Patient |
| Phenotype | 3 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| OMIM ID | 216400 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |