Overview

Variant ID 19802
Entrez Gene ID 283982
Gene LINC00469 (GeneCards)
Location hg19 17:72143019-72143019
hg38 17:74146880-74146880
Disease Asymptomatic
Method HiSeq X Ten
Mutation(HGVS format) NC_000017.10:g.72143019 A>C (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 81195210

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score -0.148
CADD Raw score (version 1.3) -0.356827 (Deleterious)
FATHMM raw prediction score 0.13297 (Tolerated)
Deleterious probability by DeFine 0.6328 (Deleterious)
Entrez Gene ID 283982 (NCBI Gene)
Official Gene Symbol LINC00469 (GeneCards)
Number of variants in LINC00469 in this database 7 (view all the variants)
Full name long intergenic non-protein coding RNA 469
Band 17q25.1
Other IDs HGNC: HGNC:26863
Other names C17orf54
Summary None

Individual #1

Individual ID 29217584.03 (view all the variants in this individual)
Pubmed ID 29217584
Whose mosaic mutation Normal  
Phenotype 1  
Disease Asymptomatic
OMIM ID

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;