| Variant ID | 20128 |
|---|---|
| Entrez Gene ID | 101928165 |
| Gene | CASC17 (GeneCards) |
| Location | hg19 17:69681698-69681698
hg38 17:71685557-71685557 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000017.10:g.69681698 G>A (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 81195210 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | -0.0921 |
| CADD Raw score (version 1.3) | 0.542318 (Deleterious) |
| FATHMM raw prediction score | 0.18646 (Tolerated) |
| Deleterious probability by DeFine | 0.078 (Neutral) |
| Entrez Gene ID | 101928165 (NCBI Gene) |
|---|---|
| Official Gene Symbol | CASC17 (GeneCards) |
| Number of variants in CASC17 in this database | 8 (view all the variants) |
| Full name | cancer susceptibility 17 |
| Band | 17q24.3 |
| Other IDs | HGNC: HGNC:43911 Ensembl: ENSG00000260785 |
| Other names | LINC00600 |
| Summary | None |
| Individual ID | 29217584.19 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Female Patient |
| Phenotype | 3 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| OMIM ID | 216400 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |