| Variant ID | 20218 |
|---|---|
| Entrez Gene ID | 100505474 |
| Gene | LINC01539 (GeneCards) |
| Location | hg19 18:53803302-53803302
hg38 18:56136071-56136071 |
| Disease | Asymptomatic |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000018.9:g.53803302 G>C (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 78077248 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | 0.2131 |
| CADD Raw score (version 1.3) | -0.09808 (Deleterious) |
| FATHMM raw prediction score | 0.16984 (Tolerated) |
| Deleterious probability by DeFine | 0.406 (Neutral) |
| Entrez Gene ID | 100505474 (NCBI Gene) |
|---|---|
| Official Gene Symbol | LINC01539 (GeneCards) |
| Number of variants in LINC01539 in this database | 6 (view all the variants) |
| Full name | long intergenic non-protein coding RNA 1539 |
| Band | 18q21.2 |
| Other IDs | HGNC: HGNC:51307 Ensembl: ENSG00000267712 |
| Other names | None |
| Summary | None |
| Individual ID | 29217584.03 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Normal |
| Phenotype | 1 |
| Disease | Asymptomatic |
| OMIM ID |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |