Overview

Variant ID 22000
Entrez Gene ID 11141
Gene IL1RAPL1 (GeneCards)
Location hg19 X:28750574-28750574
hg38 X:28732457-28732457
Disease Asymptomatic
Method HiSeq X Ten
Mutation(HGVS format) NC_000023.10:g.28750574 C>G (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 155270560

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
CADD Raw score (version 1.3) 0.337444 (Deleterious)
FATHMM raw prediction score 0.13317 (Tolerated)
Deleterious probability by DeFine 0.4309 (Neutral)
Entrez Gene ID 11141 (NCBI Gene)
Official Gene Symbol IL1RAPL1 (GeneCards)
Number of variants in IL1RAPL1 in this database 14 (view all the variants)
Full name interleukin 1 receptor accessory protein like 1
Band Xp21.3-p21.2
Other IDs Vega: OTTHUMG00000021317
OMIM: 300206
HGNC: HGNC:5996
Ensembl: ENSG00000169306
Other names IL1R8, MRX10, MRX21, MRX34, OPHN4, IL1RAPL, TIGIRR-2, IL1RAPL-1, IL-1RAPL-1, IL-1-RAPL-1
Summary The protein encoded by this gene is a member of the interleukin 1 receptor family and is similar to the interleukin 1 accessory proteins. This protein has an N-terminal signal peptide, three extracellular immunoglobulin Ig-like domains, a transmembrane domain, an intracellular Toll/IL-1R domain, and a long C-terminal tail which interacts with multiple signalling molecules. This gene is located at a region on chromosome X that is associated with a non-syndromic form of X-linked intellectual disability. Deletions and mutations in this gene were found in patients with intellectual disability. This gene is expressed at a high level in post-natal brain structures involved in the hippocampal memory system, which suggests a specialized role in the physiological processes underlying memory and learning abilities, and plays a role in synapse formation and stabilization. [provided by RefSeq, Jul 2017]

Individual #1

Individual ID 29217584.03 (view all the variants in this individual)
Pubmed ID 29217584
Whose mosaic mutation Normal  
Phenotype 1  
Disease Asymptomatic
OMIM ID

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;