Variant ID | 22013 |
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Entrez Gene ID | 1183 |
Gene | CLCN4 (GeneCards) |
Location | hg19 X:10200927-10200927
hg38 X:10232887-10232887 |
Disease | Asymptomatic |
Method | HiSeq X Ten |
Mutation(HGVS format) | NC_000023.10:g.10200927 A>G (Genome Assembly: GRCh37) |
Exon or Intron | NA |
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Position in protein | NA |
Amino acid changes in protein | NA > NA |
Position in cDNA | NA |
Changes in cDNA | NA > NA |
mRNA accession | NA |
mRNA length | NA |
Reference length | 155270560 |
MAF in gnomAD genome (version 2.0.1) | 0 |
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CADD Raw score (version 1.3) | -0.115192 (Deleterious) |
FATHMM raw prediction score | 0.10722 (Tolerated) |
Deleterious probability by DeFine | 0.3284 (Neutral) |
Entrez Gene ID | 1183 (NCBI Gene) |
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Official Gene Symbol | CLCN4 (GeneCards) |
Number of variants in CLCN4 in this database | 1 (view all the variants) |
Full name | chloride voltage-gated channel 4 |
Band | Xp22.2 |
Other IDs | Vega: OTTHUMG00000021125 OMIM: 302910 HGNC: HGNC:2022 Ensembl: ENSG00000073464 |
Other names | CLC4, ClC-4, MRX15, MRX49, ClC-4A |
Summary | The CLCN family of voltage-dependent chloride channel genes comprises nine members (CLCN1-7, Ka and Kb) which demonstrate quite diverse functional characteristics while sharing significant sequence homology. Chloride channel 4 has an evolutionary conserved CpG island and is conserved in both mouse and hamster. This gene is mapped in close proximity to APXL (Apical protein Xenopus laevis-like) and OA1 (Ocular albinism type I), which are both located on the human X chromosome at band p22.3. The physiological role of chloride channel 4 remains unknown but may contribute to the pathogenesis of neuronal disorders. Alternate splicing results in two transcript variants that encode different proteins. [provided by RefSeq, Mar 2012] |
Individual ID | 29217584.03 (view all the variants in this individual) |
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Pubmed ID | 29217584 |
Whose mosaic mutation | Normal |
Phenotype | 1 |
Disease | Asymptomatic |
OMIM ID |
Pubmed ID | 29217584 |
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Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
Journal | Science |
Publication date | 2018.02 |
Disease | Cockayne syndrome Xeroderma Pigmentosum |
Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |