Overview

Variant ID 22013
Entrez Gene ID 1183
Gene CLCN4 (GeneCards)
Location hg19 X:10200927-10200927
hg38 X:10232887-10232887
Disease Asymptomatic
Method HiSeq X Ten
Mutation(HGVS format) NC_000023.10:g.10200927 A>G (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 155270560

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
CADD Raw score (version 1.3) -0.115192 (Deleterious)
FATHMM raw prediction score 0.10722 (Tolerated)
Deleterious probability by DeFine 0.3284 (Neutral)
Entrez Gene ID 1183 (NCBI Gene)
Official Gene Symbol CLCN4 (GeneCards)
Number of variants in CLCN4 in this database 1 (view all the variants)
Full name chloride voltage-gated channel 4
Band Xp22.2
Other IDs Vega: OTTHUMG00000021125
OMIM: 302910
HGNC: HGNC:2022
Ensembl: ENSG00000073464
Other names CLC4, ClC-4, MRX15, MRX49, ClC-4A
Summary The CLCN family of voltage-dependent chloride channel genes comprises nine members (CLCN1-7, Ka and Kb) which demonstrate quite diverse functional characteristics while sharing significant sequence homology. Chloride channel 4 has an evolutionary conserved CpG island and is conserved in both mouse and hamster. This gene is mapped in close proximity to APXL (Apical protein Xenopus laevis-like) and OA1 (Ocular albinism type I), which are both located on the human X chromosome at band p22.3. The physiological role of chloride channel 4 remains unknown but may contribute to the pathogenesis of neuronal disorders. Alternate splicing results in two transcript variants that encode different proteins. [provided by RefSeq, Mar 2012]

Individual #1

Individual ID 29217584.03 (view all the variants in this individual)
Pubmed ID 29217584
Whose mosaic mutation Normal  
Phenotype 1  
Disease Asymptomatic
OMIM ID

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;