Overview

Variant ID 22017
Entrez Gene ID 389906
Gene LOC389906 (GeneCards)
Location hg19 X:3922860-3922860
hg38 X:4004819-4004819
Disease Asymptomatic
Method HiSeq X Ten
Mutation(HGVS format) NC_000023.10:g.3922860 C>G (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 155270560

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
CADD Raw score (version 1.3) -0.151696 (Deleterious)
FATHMM raw prediction score 0.11125 (Tolerated)
Deleterious probability by DeFine 0.0649 (Neutral)
Entrez Gene ID 389906 (NCBI Gene)
Official Gene Symbol LOC389906 (GeneCards)
Number of variants in LOC389906 in this database 5 (view all the variants)
Full name zinc finger protein 839 pseudogene
Band Xp22.33
Other IDs None:
Other names None
Summary None

Individual #1

Individual ID 29217584.03 (view all the variants in this individual)
Pubmed ID 29217584
Whose mosaic mutation Normal  
Phenotype 1  
Disease Asymptomatic
OMIM ID

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;