| Variant ID | 22664 |
|---|---|
| Entrez Gene ID | 1788 |
| Gene | DNMT3A (GeneCards) |
| Location | hg19 2:25459792-25459792
hg38 2:25236923-25236923 |
| Disease | Asymptomatic |
| Method | Single cell Sequencing Cell cloning |
| Mutation(HGVS format) | NC_000002.11:g.25459792 C>T (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 243199373 |
| MAF in gnomAD genome (version 2.0.1) | 0.0002 |
|---|---|
| SNP ID (dbSNP ID version 137) | rs143620117 |
| EIGEN score | -0.2733 |
| CADD Raw score (version 1.3) | -0.15961 (Deleterious) |
| FATHMM raw prediction score | 0.17536 (Tolerated) |
| Deleterious probability by DeFine | 0.9165 (Deleterious) |
| Entrez Gene ID | 1788 (NCBI Gene) |
|---|---|
| Official Gene Symbol | DNMT3A (GeneCards) |
| Number of variants in DNMT3A in this database | 139 (view all the variants) |
| Full name | DNA methyltransferase 3 alpha |
| Band | 2p23.3 |
| Other IDs | Vega: OTTHUMG00000094777 OMIM: 602769 HGNC: HGNC:2978 Ensembl: ENSG00000119772 |
| Other names | TBRS, DNMT3A2, M.HsaIIIA |
| Summary | CpG methylation is an epigenetic modification that is important for embryonic development, imprinting, and X-chromosome inactivation. Studies in mice have demonstrated that DNA methylation is required for mammalian development. This gene encodes a DNA methyltransferase that is thought to function in de novo methylation, rather than maintenance methylation. The protein localizes to the cytoplasm and nucleus and its expression is developmentally regulated. [provided by RefSeq, Mar 2016] |
| Individual ID | 29217587.01 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217587 |
| Whose mosaic mutation | Normal |
| Phenotype | 1 |
| Disease | Asymptomatic |
| OMIM ID |
| Pubmed ID | 29217587 |
|---|---|
| Title | Different mutational rates and mechanisms in human cells at pregastrulation and neurogenesis. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Asymptomatic |
| Number of cases | cases of unknown sex: 3; |