Overview

Variant ID 25259
Entrez Gene ID 79718
Gene TBL1XR1 (GeneCards)
Location hg19 3:176963084-176963084
hg38 3:177245296-177245296
Disease Asymptomatic
Method Single cell Sequencing Cell cloning
Mutation(HGVS format) NC_000003.11:g.176963084 G>A (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 198022430

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score -0.325
CADD Raw score (version 1.3) 0.025188 (Deleterious)
FATHMM raw prediction score 0.145 (Tolerated)
Deleterious probability by DeFine 0.0852 (Neutral)
Entrez Gene ID 79718 (NCBI Gene)
Official Gene Symbol TBL1XR1 (GeneCards)
Number of variants in TBL1XR1 in this database 3 (view all the variants)
Full name transducin beta like 1 X-linked receptor 1
Band 3q26.32
Other IDs Vega: OTTHUMG00000157140
OMIM: 608628
HGNC: HGNC:29529
Ensembl: ENSG00000177565
Other names C21, DC42, IRA1, MRD41, TBLR1
Summary This gene is a member of the WD40 repeat-containing gene family and shares sequence similarity with transducin (beta)-like 1X-linked (TBL1X). The protein encoded by this gene is thought to be a component of both nuclear receptor corepressor (N-CoR) and histone deacetylase 3 (HDAC 3) complexes, and is required for transcriptional activation by a variety of transcription factors. Mutations in these gene have been associated with some autism spectrum disorders, and one finding suggests that haploinsufficiency of this gene may be a cause of intellectual disability with dysmorphism. Mutations in this gene as well as recurrent translocations involving this gene have also been observed in some tumors. [provided by RefSeq, Mar 2016]

Individual #1

Individual ID 29217587.02 (view all the variants in this individual)
Pubmed ID 29217587
Whose mosaic mutation Normal  
Phenotype 1  
Disease Asymptomatic
OMIM ID