Overview

Variant ID 25872
Entrez Gene ID 324
Gene APC (GeneCards)
Location hg19 5:112060023-112060023
hg38 5:112724326-112724326
Disease Asymptomatic
Method Single cell Sequencing Cell cloning
Mutation(HGVS format) NC_000005.9:g.112060023 T>G (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 180915260

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score -0.4852
CADD Raw score (version 1.3) -0.241496 (Deleterious)
FATHMM raw prediction score 0.04555 (Tolerated)
Deleterious probability by DeFine 0.4821 (Neutral)
Entrez Gene ID 324 (NCBI Gene)
Official Gene Symbol APC (GeneCards)
Number of variants in APC in this database 13 (view all the variants)
Full name APC, WNT signaling pathway regulator
Band 5q22.2
Other IDs Vega: OTTHUMG00000128806
OMIM: 611731
HGNC: HGNC:583
Ensembl: ENSG00000134982
Other names GS, DP2, DP3, BTPS2, DP2.5, PPP1R46
Summary This gene encodes a tumor suppressor protein that acts as an antagonist of the Wnt signaling pathway. It is also involved in other processes including cell migration and adhesion, transcriptional activation, and apoptosis. Defects in this gene cause familial adenomatous polyposis (FAP), an autosomal dominant pre-malignant disease that usually progresses to malignancy. Disease-associated mutations tend to be clustered in a small region designated the mutation cluster region (MCR) and result in a truncated protein product. [provided by RefSeq, Jul 2008]

Individual #1

Individual ID 29217587.02 (view all the variants in this individual)
Pubmed ID 29217587
Whose mosaic mutation Normal  
Phenotype 1  
Disease Asymptomatic
OMIM ID