Overview

Variant ID 27731
Entrez Gene ID 9882
Gene TBC1D4 (GeneCards)
Location hg19 13:76057984-76057984
hg38 13:75483848-75483848
Disease Asymptomatic
Method Single cell Sequencing Cell cloning
Mutation(HGVS format) NC_000013.10:g.76057984 G>A (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 115169878

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0.0001
EIGEN score -0.6682
CADD Raw score (version 1.3) -0.544539 (Deleterious)
FATHMM raw prediction score 0.0464 (Tolerated)
Deleterious probability by DeFine 0.1781 (Neutral)
Entrez Gene ID 9882 (NCBI Gene)
Official Gene Symbol TBC1D4 (GeneCards)
Number of variants in TBC1D4 in this database 4 (view all the variants)
Full name TBC1 domain family member 4
Band 13q22.2
Other IDs Vega: OTTHUMG00000017088
OMIM: 612465
HGNC: HGNC:19165
Ensembl: ENSG00000136111
Other names AS160, NIDDM5
Summary This gene is a member of the Tre-2/BUB2/CDC16 domain family. The protein encoded by this gene is a Rab-GTPase-activating protein, and contains two phopshotyrosine-binding domains (PTB1 and PTB2), a calmodulin-binding domain (CBD), a Rab-GTPase domain, and multiple AKT phosphomotifs. This protein is thought to play an important role in glucose homeostasis by regulating the insulin-dependent trafficking of the glucose transporter 4 (GLUT4), important for removing glucose from the bloodstream into skeletal muscle and fat tissues. Reduced expression of this gene results in an increase in GLUT4 levels at the plasma membrane, suggesting that this protein is important in intracellular retention of GLUT4 under basal conditions. When exposed to insulin, this protein is phosphorylated, dissociates from GLUT4 vesicles, resulting in increased GLUT4 at the cell surface, and enhanced glucose transport. Phosphorylation of this protein by AKT is required for proper translocation of GLUT4 to the cell surface. Individuals homozygous for a mutation in this gene are at higher risk for type 2 diabetes and have higher levels of circulating glucose and insulin levels after glucose ingestion. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Aug 2015]

Individual #1

Individual ID 29217587.03 (view all the variants in this individual)
Pubmed ID 29217587
Whose mosaic mutation Normal  
Phenotype 1  
Disease Asymptomatic
OMIM ID