Overview

Variant ID 28600
Entrez Gene ID 58495
Gene OVOL2 (GeneCards)
Location hg19 20:18033433-18033433
hg38 20:18052789-18052789
Disease Asymptomatic
Method Single cell Sequencing Cell cloning
Mutation(HGVS format) NC_000020.10:g.18033433 C>A (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 63025520

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score -0.1394
CADD Raw score (version 1.3) -0.072977 (Deleterious)
FATHMM raw prediction score 0.1826 (Tolerated)
Deleterious probability by DeFine 0.2625 (Neutral)
Entrez Gene ID 58495 (NCBI Gene)
Official Gene Symbol OVOL2 (GeneCards)
Number of variants in OVOL2 in this database 2 (view all the variants)
Full name ovo like zinc finger 2
Band 20p11.23
Other IDs Vega: OTTHUMG00000031960
OMIM: 616441
HGNC: HGNC:15804
Ensembl: ENSG00000125850
Other names CHED, CHED1, CHED2, PPCD1, ZNF339, EUROIMAGE566589
Summary This gene encodes a member of the evolutionarily conserved ovo-like protein family. Mammalian members of this family contain a single zinc finger domain composed of a tetrad of C2H2 zinc fingers with variable N- and C-terminal extensions that contain intrinsically disordered domains. Members of this family are involved in epithelial development and differentiation. Knockout of this gene in mouse results in early embryonic lethality with phenotypes that include neurectoderm expansion, impaired vascularization, and heart anomalies. In humans, allelic variants of this gene have been associated with posterior polymorphous corneal dystrophy. [provided by RefSeq, Apr 2016]

Individual #1

Individual ID 29217587.03 (view all the variants in this individual)
Pubmed ID 29217587
Whose mosaic mutation Normal  
Phenotype 1  
Disease Asymptomatic
OMIM ID