Overview

Variant ID 28730
Entrez Gene ID 9215
Gene LARGE (GeneCards)
Location hg19 22:34642193-34642193
hg38 22:34246204-34246204
Disease Asymptomatic
Method Single cell Sequencing Cell cloning
Mutation(HGVS format) NC_000022.10:g.34642193 G>T (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 51304566

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score -0.1934
CADD Raw score (version 1.3) -0.214979 (Deleterious)
FATHMM raw prediction score 0.11621 (Tolerated)
Deleterious probability by DeFine 0.4402 (Neutral)
Entrez Gene ID 9215 (NCBI Gene)
Official Gene Symbol LARGE (GeneCards)
Number of variants in LARGE1 in this database 33 (view all the variants)
Full name LARGE xylosyl- and glucuronyltransferase 1
Band 22q12.3
Other IDs Vega: OTTHUMG00000150914
OMIM: 603590
HGNC: HGNC:6511
Ensembl: ENSG00000133424
Other names LARGE, MDC1D, MDDGA6, MDDGB6
Summary This gene encodes a member of the N-acetylglucosaminyltransferase gene family. It encodes a glycosyltransferase which participates in glycosylation of alpha-dystroglycan, and may carry out the synthesis of glycoprotein and glycosphingolipid sugar chains. It may also be involved in the addition of a repeated disaccharide unit. The protein encoded by this gene is the glycotransferase that adds the final xylose and glucuronic acid to alpha-dystroglycan and thereby allows alpha-dystroglycan to bind ligands including laminin 211 and neurexin. Mutations in this gene cause several forms of congenital muscular dystrophy characterized by cognitive disability and abnormal glycosylation of alpha-dystroglycan. Alternative splicing of this gene results in multiple transcript variants that encode the same protein. [provided by RefSeq, May 2018]

Individual #1

Individual ID 29217587.02 (view all the variants in this individual)
Pubmed ID 29217587
Whose mosaic mutation Normal  
Phenotype 1  
Disease Asymptomatic
OMIM ID