Overview

Variant ID 29132
Entrez Gene ID 132612
Gene ADAD1 (GeneCards)
Location hg19 4:123342540-123342540
hg38 4:122421385-122421385
Disease Autism Spectrum Disorders (view all the variants in this disease)
Method PASM
Mutation(HGVS format) NC_000004.11:g.123342540 G>A (Genome Assembly: GRCh37)

Other information

Exon or Intron Exon
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 191154276

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score 0.7083
CADD Raw score (version 1.3) 6.70512 (Deleterious)
FATHMM raw prediction score 0.96685 (Tolerated)
SIFT score 0.056 (Tolerated)
LRT score 0 (Deleterious)
MutationTaster score 1 (Deleterious)
MutatioinAssessor score 2.36 (Deleterious)
PROVEAN score -3.29 (Deleterious)
MetaSVM score 0.936 (Deleterious)
MetaLR score 0.885 (Deleterious)
MCAP score 0.438 (Deleterious)
FitCons score 0.487 (Highly Significant p < 0.003 )
Genomic Evolutionary Rate Profiling (GERP) score 4.93
PhyloP score based on multiple alignment of 100 vertebrates 7.757
PhastCons score based on multiple alignment of 100 vertebrates 1
SiPhy log transformed odds ratio on multiple alignment of 29 mammals 17.755
Deleterious probability by iFish2 0.5706 (Deleterious)
Deleterious probability by DeFine 0.9337 (Deleterious)
Entrez Gene ID 132612 (NCBI Gene)
Official Gene Symbol ADAD1 (GeneCards)
Number of variants in ADAD1 in this database 2 (view all the variants)
Full name adenosine deaminase domain containing 1
Band 4q27
Other IDs Vega: OTTHUMG00000150128
OMIM: 614130
HGNC: HGNC:30713
Ensembl: ENSG00000164113
Other names Tenr
Summary None

Individual #1

Individual ID 28503910.09 (view all the variants in this individual)
Pubmed ID 28503910
Whose mosaic mutation Patient  
Phenotype 3  
Disease Autism Spectrum Disorders (view all the variants in this disease)
OMIM ID 209850

Publication #1: 28503910

Pubmed ID 28503910
Title Postzygotic single-nucleotide mosaicisms contribute to the etiology of autism spectrum disorder and autistic traits and the origin of mutations
Journal Human Mutation
Publication date 2017.05
Disease Autism Spectrum Disorders
Incidence 0.01
Number of cases cases of unknown sex: 215;