Overview

Variant ID 29247
Entrez Gene ID 114792
Gene KLHL32 (GeneCards)
Location hg19 6:97561801-97561801
hg38 6:97113925-97113925
Disease Autism Spectrum Disorders (view all the variants in this disease)
Method PASM
Mutation(HGVS format) NC_000006.11:g.97561801 C>T (Genome Assembly: GRCh37)

Other information

Exon or Intron Exon
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 171115067

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score -0.1474
CADD Raw score (version 1.3) 0.776852 (Deleterious)
FATHMM raw prediction score 0.94359 (Tolerated)
SIFT score 0.11 (Tolerated)
LRT score 0 (Deleterious)
MutationTaster score 1 (Deleterious)
MutatioinAssessor score 0.11 (Tolerated)
PROVEAN score -0.83 (Tolerated)
MetaSVM score -0.885 (Tolerated)
MetaLR score 0.147 (Tolerated)
MCAP score 0.017 (Tolerated)
FitCons score 0.554 (Highly Significant p < 0.003 )
Genomic Evolutionary Rate Profiling (GERP) score 5.09
PhyloP score based on multiple alignment of 100 vertebrates 3.654
PhastCons score based on multiple alignment of 100 vertebrates 0.998
SiPhy log transformed odds ratio on multiple alignment of 29 mammals 18.674
Deleterious probability by iFish2 0.6898 (Deleterious)
Deleterious probability by DeFine 0.9715 (Deleterious)
Entrez Gene ID 114792 (NCBI Gene)
Official Gene Symbol KLHL32 (GeneCards)
Number of variants in KLHL32 in this database 3 (view all the variants)
Full name kelch like family member 32
Band 6q16.1
Other IDs Vega: OTTHUMG00000015247
HGNC: HGNC:21221
Ensembl: ENSG00000186231
Other names BKLHD5, KIAA1900, dJ21F7.1, UG0030H05
Summary None

Individual #1

Individual ID 28503910.123 (view all the variants in this individual)
Pubmed ID 28503910
Whose mosaic mutation Normal  
Phenotype 2  
Disease Autism Spectrum Disorders (view all the variants in this disease)
OMIM ID 209850

Publication #1: 28503910

Pubmed ID 28503910
Title Postzygotic single-nucleotide mosaicisms contribute to the etiology of autism spectrum disorder and autistic traits and the origin of mutations
Journal Human Mutation
Publication date 2017.05
Disease Autism Spectrum Disorders
Incidence 0.01
Number of cases cases of unknown sex: 215;