Overview

Variant ID 29256
Entrez Gene ID 440993
Gene LINC00969 (GeneCards)
Location hg19 3:195426077-195426077
hg38 3:195699206-195699206
Disease Autism Spectrum Disorders (view all the variants in this disease)
Method PASM
Mutation(HGVS format) NC_000003.11:g.195426077 T>A (Genome Assembly: GRCh37)

Other information

Exon or Intron Intron
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 198022430

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0.018
SNP ID (dbSNP ID version 137) rs113141255
EIGEN score -0.2429
CADD Raw score (version 1.3) 0.412436 (Deleterious)
FATHMM raw prediction score 0.15573 (Tolerated)
Deleterious probability by DeFine 0.1204 (Neutral)
Entrez Gene ID 440993 (NCBI Gene)
Official Gene Symbol LINC00969 (GeneCards)
Number of variants in MIR570HG in this database 1 (view all the variants)
Full name MIR570 host gene
Band 3q29
Other IDs HGNC: HGNC:53743
Other names LINC00969
Summary None

Individual #1

Individual ID 28503910.133 (view all the variants in this individual)
Pubmed ID 28503910
Whose mosaic mutation Patient  
Phenotype 3  
Disease Autism Spectrum Disorders (view all the variants in this disease)
OMIM ID 209850

Publication #1: 28503910

Pubmed ID 28503910
Title Postzygotic single-nucleotide mosaicisms contribute to the etiology of autism spectrum disorder and autistic traits and the origin of mutations
Journal Human Mutation
Publication date 2017.05
Disease Autism Spectrum Disorders
Incidence 0.01
Number of cases cases of unknown sex: 215;