Overview

Variant ID 29354
Entrez Gene ID 408050
Gene NOMO3 (GeneCards)
Location hg19 16:16367883-16367883
hg38 16:16274026-16274026
Disease Autism Spectrum Disorders (view all the variants in this disease)
Method MiSeq
Mutation(HGVS format) NC_000016.9:g.16367883 T>A (Genome Assembly: hg19)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 90354753

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score 0.8127
CADD Raw score (version 1.3) 0.667897 (Deleterious)
FATHMM raw prediction score 0.94096 (Tolerated)
Deleterious probability by DeFine 0.6974 (Deleterious)
Entrez Gene ID 408050 (NCBI Gene)
Official Gene Symbol NOMO3 (GeneCards)
Number of variants in NOMO3 in this database 1 (view all the variants)
Full name NODAL modulator 3
Band 16p13.11
Other IDs Vega: OTTHUMG00000177317
OMIM: 609159
HGNC: HGNC:25242
Ensembl: ENSG00000103226
Other names Nomo
Summary This gene encodes a protein originally thought to be related to the collagenase gene family. This gene is one of three highly similar genes in a duplicated region on the short arm of chromosome 16. These three genes encode closely related proteins that may have the same function. The protein encoded by one of these genes has been identified as part of a protein complex that participates in the Nodal signaling pathway during vertebrate development. Mutations in ABCC6, which is located nearby, rather than mutations in this gene are associated with pseudoxanthoma elasticum. [provided by RefSeq, Jul 2008]

Individual #1

Individual ID 28714951.30 (view all the variants in this individual)
Pubmed ID 28714951
Whose mosaic mutation Patient  
Phenotype 3  
Disease Autism Spectrum Disorders (view all the variants in this disease)
OMIM ID 209850

Publication #1: 28714951

Pubmed ID 28714951
Title Rates, distribution and implications of postzygotic mosaic mutations in autism spectrum disorder
Journal Nat Neurosci
Publication date 2017.07
Disease Autism Spectrum Disorders
Incidence 0.01
Number of cases cases of unknown sex: 376;