Variant ID | 29360 |
---|---|
Entrez Gene ID | 9774 |
Gene | BCLAF1 (GeneCards) |
Location | hg19 6:136597435-136597435
hg38 6:136276297-136276297 |
Disease | Autism Spectrum Disorders (view all the variants in this disease) |
Method | MiSeq |
Mutation(HGVS format) | NC_000006.11:g.136597435 G>C (Genome Assembly: hg19) |
Exon or Intron | NA |
---|---|
Position in protein | NA |
Amino acid changes in protein | NA > NA |
Position in cDNA | NA |
Changes in cDNA | NA > NA |
mRNA accession | NA |
mRNA length | NA |
Reference length | 171115067 |
MAF in gnomAD genome (version 2.0.1) | 0 |
---|---|
EIGEN score | 0.0962 |
CADD Raw score (version 1.3) | 0.18305 (Deleterious) |
FATHMM raw prediction score | 0.95966 (Tolerated) |
SIFT score | 0.118 (Tolerated) |
LRT score | 0 (Deleterious) |
MutationTaster score | 0.997 (Deleterious) |
MutatioinAssessor score | 1.265 (Tolerated) |
PROVEAN score | -0.26 (Tolerated) |
MetaSVM score | -1.031 (Tolerated) |
MetaLR score | 0.009 (Tolerated) |
MCAP score | 0.013 (Tolerated) |
FitCons score | 0.722 (Highly Significant p < 0.003 ) |
Genomic Evolutionary Rate Profiling (GERP) score | 5.36 |
PhyloP score based on multiple alignment of 100 vertebrates | 7.59 |
PhastCons score based on multiple alignment of 100 vertebrates | 1 |
SiPhy log transformed odds ratio on multiple alignment of 29 mammals | 19.457 |
Deleterious probability by iFish2 | 0.4144 (Neutral) |
Deleterious probability by DeFine | 0.9448 (Deleterious) |
Entrez Gene ID | 9774 (NCBI Gene) |
---|---|
Official Gene Symbol | BCLAF1 (GeneCards) |
Number of variants in BCLAF1 in this database | 2 (view all the variants) |
Full name | BCL2 associated transcription factor 1 |
Band | 6q23.3 |
Other IDs | Vega: OTTHUMG00000033323 OMIM: 612588 HGNC: HGNC:16863 Ensembl: ENSG00000029363 |
Other names | BTF, bK211L9.1 |
Summary | This gene encodes a transcriptional repressor that interacts with several members of the BCL2 family of proteins. Overexpression of this protein induces apoptosis, which can be suppressed by co-expression of BCL2 proteins. The protein localizes to dot-like structures throughout the nucleus, and redistributes to a zone near the nuclear envelope in cells undergoing apoptosis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] |
Individual ID | 28714951.36 (view all the variants in this individual) |
---|---|
Pubmed ID | 28714951 |
Whose mosaic mutation | Patient |
Phenotype | 3 |
Disease | Autism Spectrum Disorders (view all the variants in this disease) |
OMIM ID | 209850 |
Pubmed ID | 28714951 |
---|---|
Title | Rates, distribution and implications of postzygotic mosaic mutations in autism spectrum disorder |
Journal | Nat Neurosci |
Publication date | 2017.07 |
Disease | Autism Spectrum Disorders |
Incidence | 0.01 |
Number of cases | cases of unknown sex: 376; |