Variant ID | 29510 |
---|---|
Entrez Gene ID | 283446 |
Gene | MYO1H (GeneCards) |
Location | hg19 12:109877458-109877458
hg38 12:109439653-109439653 |
Disease | Autism Spectrum Disorders (view all the variants in this disease) |
Method | MiSeq |
Mutation(HGVS format) | NC_000012.11:g.109877458 C>T (Genome Assembly: hg19) |
Exon or Intron | NA |
---|---|
Position in protein | NA |
Amino acid changes in protein | NA > NA |
Position in cDNA | NA |
Changes in cDNA | NA > NA |
mRNA accession | NA |
mRNA length | NA |
Reference length | 133851895 |
MAF in gnomAD genome (version 2.0.1) | 0.00003228 |
---|---|
EIGEN score | 0.7047 |
CADD Raw score (version 1.3) | 7.550026 (Deleterious) |
FATHMM raw prediction score | 0.87841 (Tolerated) |
SIFT score | 0 (Deleterious) |
MutationTaster score | 1 (Deleterious) |
MutatioinAssessor score | 3.015 (Deleterious) |
PROVEAN score | -7.68 (Deleterious) |
MetaSVM score | 0.955 (Deleterious) |
MetaLR score | 0.875 (Deleterious) |
MCAP score | 0.163 (Deleterious) |
FitCons score | 0.428 (Highly Significant p < 0.003 ) |
Genomic Evolutionary Rate Profiling (GERP) score | 5.43 |
PhyloP score based on multiple alignment of 100 vertebrates | 3.103 |
PhastCons score based on multiple alignment of 100 vertebrates | 0.993 |
SiPhy log transformed odds ratio on multiple alignment of 29 mammals | 16.753 |
Deleterious probability by iFish2 | 0.4755 (Neutral) |
Deleterious probability by DeFine | 0.9489 (Deleterious) |
Entrez Gene ID | 283446 (NCBI Gene) |
---|---|
Official Gene Symbol | MYO1H (GeneCards) |
Number of variants in MYO1H in this database | 2 (view all the variants) |
Full name | myosin IH |
Band | 12q24.11 |
Other IDs | Vega: OTTHUMG00000169252 OMIM: 614636 HGNC: HGNC:13879 Ensembl: ENSG00000174527 |
Other names | None |
Summary | None |
Individual ID | 28714951.186 (view all the variants in this individual) |
---|---|
Pubmed ID | 28714951 |
Whose mosaic mutation | Patient |
Phenotype | 3 |
Disease | Autism Spectrum Disorders (view all the variants in this disease) |
OMIM ID | 209850 |
Pubmed ID | 28714951 |
---|---|
Title | Rates, distribution and implications of postzygotic mosaic mutations in autism spectrum disorder |
Journal | Nat Neurosci |
Publication date | 2017.07 |
Disease | Autism Spectrum Disorders |
Incidence | 0.01 |
Number of cases | cases of unknown sex: 376; |