| Variant ID | 29785 |
|---|---|
| Entrez Gene ID | 340204 |
| Gene | CLPSL1 (GeneCards) |
| Location | hg19 6:35755695-35755695
hg38 6:35787918-35787918 |
| Disease | Autism Spectrum Disorders (view all the variants in this disease) |
| Method | NextSeq500 |
| Mutation(HGVS format) | NC_000006.11:g.35755695 A>G (Genome Assembly: hg19) |
| Exon or Intron | Exon |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 171115067 |
| MAF in gnomAD genome (version 2.0.1) | 0.00006458 |
|---|---|
| EIGEN score | -1.4377 |
| CADD Raw score (version 1.3) | -2.366626 (Deleterious) |
| FATHMM raw prediction score | 0.0028 (Tolerated) |
| SIFT score | 0.718 (Tolerated) |
| LRT score | 0.639 (Tolerated) |
| MutationTaster score | 1 (Tolerated) |
| MutatioinAssessor score | -1.04 (Tolerated) |
| PROVEAN score | 0.3 (Tolerated) |
| MetaSVM score | -0.968 (Tolerated) |
| MetaLR score | 0.011 (Tolerated) |
| MCAP score | 0.001 (Tolerated) |
| FitCons score | 0.598 (Highly Significant p < 0.003 ) |
| Genomic Evolutionary Rate Profiling (GERP) score | -1.62 |
| PhyloP score based on multiple alignment of 100 vertebrates | -0.573 |
| PhastCons score based on multiple alignment of 100 vertebrates | 0.002 |
| SiPhy log transformed odds ratio on multiple alignment of 29 mammals | 6.429 |
| Deleterious probability by iFish2 | 0.002 (Neutral) |
| Deleterious probability by DeFine | 0.7357 (Deleterious) |
| Entrez Gene ID | 340204 (NCBI Gene) |
|---|---|
| Official Gene Symbol | CLPSL1 (GeneCards) |
| Number of variants in CLPSL1 in this database | 2 (view all the variants) |
| Full name | colipase like 1 |
| Band | 6p21.31 |
| Other IDs | Vega: OTTHUMG00000014582 HGNC: HGNC:21251 Ensembl: ENSG00000204140 |
| Other names | ESP32, C6orf127, dJ510O8.6 |
| Summary | None |
| Individual ID | 28867142.37 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 28867142 |
| Whose mosaic mutation | Male Patient |
| Origin of mosaic mutation in patients | de novo |
| Phenotype | 3 |
| Disease | Autism Spectrum Disorders (view all the variants in this disease) |
| OMIM ID | 209850 |
| Pubmed ID | 28867142 |
|---|---|
| Title | Exonic Mosaic Mutations Contribute Risk for Autism Spectrum Disorder |
| Journal | American Journal of Human Genetics |
| Publication date | 2017.08 |
| Disease | Autism Spectrum Disorders |
| Incidence | 0.01 |
| Number of cases | cases of unknown sex: 247; |