Variant ID | 29847 |
---|---|
Entrez Gene ID | 28971 |
Gene | AAMDC (GeneCards) |
Location | hg19 11:77580840-77580840
hg38 11:77869794-77869794 |
Disease | Autism Spectrum Disorders (view all the variants in this disease) |
Method | NextSeq500 |
Mutation(HGVS format) | NC_000011.9:g.77580840 C>T (Genome Assembly: hg19) |
Exon or Intron | Exon |
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Position in protein | NA |
Amino acid changes in protein | NA > NA |
Position in cDNA | NA |
Changes in cDNA | NA > NA |
mRNA accession | NA |
mRNA length | NA |
Reference length | 135006516 |
MAF in gnomAD genome (version 2.0.1) | 0 |
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SNP ID (dbSNP ID version 137) | rs186614523 |
EIGEN score | 0.7494 |
CADD Raw score (version 1.3) | 12.896364 (Deleterious) |
FATHMM raw prediction score | 0.98245 (Tolerated) |
LRT score | 0 (Deleterious) |
MutationTaster score | 1 (Deleterious) |
FitCons score | 0.707 (Highly Significant p < 0.003 ) |
Genomic Evolutionary Rate Profiling (GERP) score | 4.55 |
PhyloP score based on multiple alignment of 100 vertebrates | 4.047 |
PhastCons score based on multiple alignment of 100 vertebrates | 1 |
SiPhy log transformed odds ratio on multiple alignment of 29 mammals | 14.504 |
Deleterious probability by DeFine | 0.9527 (Deleterious) |
Entrez Gene ID | 28971 (NCBI Gene) |
---|---|
Official Gene Symbol | AAMDC (GeneCards) |
Number of variants in AAMDC in this database | 1 (view all the variants) |
Full name | adipogenesis associated Mth938 domain containing |
Band | 11q14.1 |
Other IDs | Vega: OTTHUMG00000166651 HGNC: HGNC:30205 Ensembl: ENSG00000087884 |
Other names | CK067, PTD015, C11orf67 |
Summary | None |
Individual ID | 28867142.13 (view all the variants in this individual) |
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Pubmed ID | 28867142 |
Whose mosaic mutation | Female Patient |
Origin of mosaic mutation in patients | de novo |
Phenotype | 3 |
Disease | Autism Spectrum Disorders (view all the variants in this disease) |
OMIM ID | 209850 |
Pubmed ID | 28867142 |
---|---|
Title | Exonic Mosaic Mutations Contribute Risk for Autism Spectrum Disorder |
Journal | American Journal of Human Genetics |
Publication date | 2017.08 |
Disease | Autism Spectrum Disorders |
Incidence | 0.01 |
Number of cases | cases of unknown sex: 247; |