Overview

Variant ID 29855
Entrez Gene ID 54477
Gene PLEKHA5 (GeneCards)
Location hg19 12:19522658-19522658
hg38 12:19369724-19369724
Disease Autism Spectrum Disorders (view all the variants in this disease)
Method NextSeq500
Mutation(HGVS format) NC_000012.11:g.19522658 G>A (Genome Assembly: hg19)

Other information

Exon or Intron Exon
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 133851895

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0.00006457
EIGEN score 0.4777
CADD Raw score (version 1.3) 2.058927 (Deleterious)
FATHMM raw prediction score 0.14139 (Tolerated)
Deleterious probability by DeFine 0.6409 (Deleterious)
Entrez Gene ID 54477 (NCBI Gene)
Official Gene Symbol PLEKHA5 (GeneCards)
Number of variants in PLEKHA5 in this database 4 (view all the variants)
Full name pleckstrin homology domain containing A5
Band 12p12.3
Other IDs Vega: OTTHUMG00000167921
OMIM: 607770
HGNC: HGNC:30036
Ensembl: ENSG00000052126
Other names PEPP2, PEPP-2
Summary None

Individual #1

Individual ID 28867142.14 (view all the variants in this individual)
Pubmed ID 28867142
Whose mosaic mutation Female Patient  
Origin of mosaic mutation in patients de novo
Phenotype 3  
Disease Autism Spectrum Disorders (view all the variants in this disease)
OMIM ID 209850

Publication #1: 28867142

Pubmed ID 28867142
Title Exonic Mosaic Mutations Contribute Risk for Autism Spectrum Disorder
Journal American Journal of Human Genetics
Publication date 2017.08
Disease Autism Spectrum Disorders
Incidence 0.01
Number of cases cases of unknown sex: 247;