Overview

Variant ID 34431
Entrez Gene ID 23362
Gene PSD3 (GeneCards)
Location hg19 8:18463514-18463514
hg38 8:18606004-18606004
Disease Asymptomatic
Method Whole Genome Sequencing Ion Torrent PGM Sequencing
Mutation(HGVS format) NC_000008.10:g.18463514 G>A (Genome Assembly: hg19)

Other information

Exon or Intron intron
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 146364022

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score -0.2799
CADD Raw score (version 1.3) 0.127145 (Deleterious)
FATHMM raw prediction score 0.09702 (Tolerated)
Deleterious probability by DeFine 0.065 (Neutral)
Entrez Gene ID 23362 (NCBI Gene)
Official Gene Symbol PSD3 (GeneCards)
Number of variants in PSD3 in this database 16 (view all the variants)
Full name pleckstrin and Sec7 domain containing 3
Band 8p22
Other IDs Vega: OTTHUMG00000163711
OMIM: 614440
HGNC: HGNC:19093
Ensembl: ENSG00000156011
Other names EFA6D, EFA6R, HCA67
Summary None

Individual #1

Individual ID 24760347.01 (view all the variants in this individual)
Pubmed ID 24760347
Whose mosaic mutation Normal  
Phenotype 1  
Disease Asymptomatic
OMIM ID

Publication #1: 24760347

Pubmed ID 24760347
Title Somatic mutations found in the healthy blood compartment of a 115-yr-old woman demonstrate oligoclonal hematopoiesis
Journal Genome Research
Publication date 2014.04
Disease Asymptomatic
Number of cases Female cases: 1;