Overview

Variant ID 3616
Entrez Gene ID 28951
Gene TRIB2 (GeneCards)
Location hg19 2:12887384-12887384
hg38 2:12747258-12747258
Disease
Method HiSeq X Ten
Mutation(HGVS format) NC_000002.11:g.12887384 G>A (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 243199373

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score -0.3444
CADD Raw score (version 1.3) -0.385811 (Deleterious)
FATHMM raw prediction score 0.08921 (Tolerated)
Deleterious probability by DeFine 0.176 (Neutral)
Entrez Gene ID 28951 (NCBI Gene)
Official Gene Symbol TRIB2 (GeneCards)
Number of variants in TRIB2 in this database 3 (view all the variants)
Full name tribbles pseudokinase 2
Band 2p24.3
Other IDs Vega: OTTHUMG00000090575
OMIM: 609462
HGNC: HGNC:30809
Ensembl: ENSG00000071575
Other names C5FW, TRB2, GS3955
Summary This gene encodes one of three members of the Tribbles family. The Tribbles members share a Trb domain, which is homologous to protein serine-threonine kinases, but lacks the active site lysine and probably lacks a catalytic function. The Tribbles proteins interact and modulate the activity of signal transduction pathways in a number of physiological and pathological processes. This Tribbles member induces apoptosis of cells mainly of the hematopoietic origin. It has been identified as a protein up-regulated by inflammatory stimuli in myeloid (THP-1) cells, and also as an oncogene that inactivates the transcription factor C/EBPalpha (CCAAT/enhancer-binding protein alpha) and causes acute myelogenous leukemia. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Mar 2009]

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;