Overview

Variant ID 4275
Entrez Gene ID 57628
Gene DPP10 (GeneCards)
Location hg19 2:117724552-117724552
hg38 2:116966976-116966976
Disease Cockayne syndrome (view all the variants in this disease)
Method HiSeq X Ten
Mutation(HGVS format) NC_000002.11:g.117724552 G>A (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 243199373

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score -0.1494
CADD Raw score (version 1.3) -0.009737 (Deleterious)
FATHMM raw prediction score 0.08 (Tolerated)
Deleterious probability by DeFine 0.5936 (Deleterious)
Entrez Gene ID 57628 (NCBI Gene)
Official Gene Symbol DPP10 (GeneCards)
Number of variants in DPP10 in this database 45 (view all the variants)
Full name dipeptidyl peptidase like 10
Band 2q14.1
Other IDs Vega: OTTHUMG00000153294
OMIM: 608209
HGNC: HGNC:20823
Ensembl: ENSG00000175497
Other names DPL2, DPPY, DPRP3, DPRP-3
Summary This gene encodes a single-pass type II membrane protein that is a member of the S9B family in clan SC of the serine proteases. This protein has no detectable protease activity, most likely due to the absence of the conserved serine residue normally present in the catalytic domain of serine proteases. However, it does bind specific voltage-gated potassium channels and alters their expression and biophysical properties. Mutations in this gene have been associated with asthma. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. [provided by RefSeq, Jul 2008]

Individual #1

Individual ID 29217584.16 (view all the variants in this individual)
Pubmed ID 29217584
Whose mosaic mutation Female Patient  
Phenotype 3  
Disease Cockayne syndrome (view all the variants in this disease)
OMIM ID 216400

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;