Overview

Variant ID 4511
Entrez Gene ID 101929282
Gene LOC101929282 (GeneCards)
Location hg19 2:151992242-151992242
hg38 2:151135728-151135728
Disease Xeroderma Pigmentosum (view all the variants in this disease)
Method HiSeq X Ten
Mutation(HGVS format) NC_000002.11:g.151992242 C>T (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 243199373

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0
EIGEN score -0.4125
CADD Raw score (version 1.3) -0.204508 (Deleterious)
FATHMM raw prediction score 0.06685 (Tolerated)
Deleterious probability by DeFine 0.1946 (Neutral)
Entrez Gene ID 101929282 (NCBI Gene)
Official Gene Symbol LOC101929282 (GeneCards)
Number of variants in LOC101929282 in this database 8 (view all the variants)
Full name uncharacterized LOC101929282
Band 2q23.3
Other IDs Ensembl: ENSG00000224048
Other names None
Summary None

Individual #1

Individual ID 29217584.23 (view all the variants in this individual)
Pubmed ID 29217584
Whose mosaic mutation Female Patient  
Phenotype 3  
Disease Xeroderma Pigmentosum (view all the variants in this disease)
OMIM ID 278700

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;