| Variant ID | 5903 |
|---|---|
| Entrez Gene ID | 401082 |
| Gene | LINC01205 (GeneCards) |
| Location | hg19 3:109172697-109172697
hg38 3:109453850-109453850 |
| Disease | Xeroderma Pigmentosum (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000003.11:g.109172697 G>A (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 198022430 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | -0.2781 |
| CADD Raw score (version 1.3) | -0.089878 (Deleterious) |
| FATHMM raw prediction score | 0.06489 (Tolerated) |
| Deleterious probability by DeFine | 0.0397 (Neutral) |
| Entrez Gene ID | 401082 (NCBI Gene) |
|---|---|
| Official Gene Symbol | LINC01205 (GeneCards) |
| Number of variants in LINC01205 in this database | 4 (view all the variants) |
| Full name | long intergenic non-protein coding RNA 1205 |
| Band | 3q13.13 |
| Other IDs | HGNC: HGNC:49636 Ensembl: ENSG00000228980 |
| Other names | None |
| Summary | None |
| Individual ID | 29217584.23 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Female Patient |
| Phenotype | 3 |
| Disease | Xeroderma Pigmentosum (view all the variants in this disease) |
| OMIM ID | 278700 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |