Overview

Variant ID 6540
Entrez Gene ID 2895
Gene GRID2 (GeneCards)
Location hg19 4:94194620-94194620
hg38 4:93273469-93273469
Disease
Method HiSeq X Ten
Mutation(HGVS format) NC_000004.11:g.94194620 C>G (Genome Assembly: GRCh37)

Other information

Exon or Intron NA
Position in protein NA
Amino acid changes in protein NA > NA
Position in cDNA NA
Changes in cDNA NA > NA
mRNA accession NA
mRNA length NA
Reference length 191154276

Annotations and predictions

MAF in gnomAD genome (version 2.0.1) 0.0002
SNP ID (dbSNP ID version 137) rs202102321
EIGEN score -0.4187
CADD Raw score (version 1.3) -0.334022 (Deleterious)
FATHMM raw prediction score 0.11166 (Tolerated)
Deleterious probability by DeFine 0.0652 (Neutral)
Entrez Gene ID 2895 (NCBI Gene)
Official Gene Symbol GRID2 (GeneCards)
Number of variants in GRID2 in this database 14 (view all the variants)
Full name glutamate ionotropic receptor delta type subunit 2
Band 4q22.1-q22.2
Other IDs Vega: OTTHUMG00000130975
OMIM: 602368
HGNC: HGNC:4576
Ensembl: ENSG00000152208
Other names GlD2, SCAR18
Summary The protein encoded by this gene is a member of the family of ionotropic glutamate receptors which are the predominant excitatory neurotransmitter receptors in the mammalian brain. The encoded protein is a multi-pass membrane protein that is expressed selectively in cerebellar Purkinje cells. A point mutation in the mouse ortholog, associated with the phenotype named 'lurcher', in the heterozygous state leads to ataxia resulting from selective, cell-autonomous apoptosis of cerebellar Purkinje cells during postnatal development. Mice homozygous for this mutation die shortly after birth from massive loss of mid- and hindbrain neurons during late embryogenesis. This protein also plays a role in synapse organization between parallel fibers and Purkinje cells. Alternate splicing results in multiple transcript variants encoding distinct isoforms. Mutations in this gene cause cerebellar ataxia in humans. [provided by RefSeq, Apr 2014]

Publication #1: 29217584

Pubmed ID 29217584
Title Aging and neurodegeneration are associated with increased mutations in single human neurons.
Journal Science
Publication date 2018.02
Disease Cockayne syndrome Xeroderma Pigmentosum
Number of cases Male cases: 3; Female cases: 6; cases of unknown sex: 15;