| Variant ID | 7119 |
|---|---|
| Entrez Gene ID | 254251 |
| Gene | LCORL (GeneCards) |
| Location | hg19 4:18071337-18071337
hg38 4:18069714-18069714 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000004.11:g.18071337 T>A (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 191154276 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | -0.3094 |
| CADD Raw score (version 1.3) | -0.021075 (Deleterious) |
| FATHMM raw prediction score | 0.10009 (Tolerated) |
| Deleterious probability by DeFine | 0.225 (Neutral) |
| Entrez Gene ID | 254251 (NCBI Gene) |
|---|---|
| Official Gene Symbol | LCORL (GeneCards) |
| Number of variants in LCORL in this database | 41 (view all the variants) |
| Full name | ligand dependent nuclear receptor corepressor like |
| Band | 4p15.31 |
| Other IDs | Vega: OTTHUMG00000128538 OMIM: 611799 HGNC: HGNC:30776 Ensembl: ENSG00000178177 |
| Other names | MLR1 |
| Summary | This gene encodes a transcription factor that appears to function in spermatogenesis. Polymorphisms in this gene are associated with measures of skeletal frame size and adult height. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2009] |
| Individual ID | 29217584.17 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Female Patient |
| Phenotype | 3 |
| Disease | Cockayne syndrome (view all the variants in this disease) |
| OMIM ID | 216400 |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |