| Variant ID | 7533 |
|---|---|
| Entrez Gene ID | 133482 |
| Gene | SLCO6A1 (GeneCards) |
| Location | hg19 5:101765507-101765507
hg38 5:102429803-102429803 |
| Disease | Asymptomatic |
| Method | HiSeq X Ten |
| Mutation(HGVS format) | NC_000005.9:g.101765507 A>T (Genome Assembly: GRCh37) |
| Exon or Intron | NA |
|---|---|
| Position in protein | NA |
| Amino acid changes in protein | NA > NA |
| Position in cDNA | NA |
| Changes in cDNA | NA > NA |
| mRNA accession | NA |
| mRNA length | NA |
| Reference length | 180915260 |
| MAF in gnomAD genome (version 2.0.1) | 0 |
|---|---|
| EIGEN score | -0.1811 |
| CADD Raw score (version 1.3) | 0.532213 (Deleterious) |
| FATHMM raw prediction score | 0.23789 (Tolerated) |
| Deleterious probability by DeFine | 0.0861 (Neutral) |
| Entrez Gene ID | 133482 (NCBI Gene) |
|---|---|
| Official Gene Symbol | SLCO6A1 (GeneCards) |
| Number of variants in SLCO6A1 in this database | 4 (view all the variants) |
| Full name | solute carrier organic anion transporter family member 6A1 |
| Band | 5q21.1 |
| Other IDs | Vega: OTTHUMG00000162759 OMIM: 613365 HGNC: HGNC:23613 Ensembl: ENSG00000205359 |
| Other names | GST, CT48, OATPY, OATP-I, OATP6A1 |
| Summary | None |
| Individual ID | 29217584.03 (view all the variants in this individual) |
|---|---|
| Pubmed ID | 29217584 |
| Whose mosaic mutation | Normal |
| Phenotype | 1 |
| Disease | Asymptomatic |
| OMIM ID |
| Pubmed ID | 29217584 |
|---|---|
| Title | Aging and neurodegeneration are associated with increased mutations in single human neurons. |
| Journal | Science |
| Publication date | 2018.02 |
| Disease | Cockayne syndrome Xeroderma Pigmentosum |
| Number of cases | Male cases: 3; Female cases: 6; cases of unknown sex: 15; |